PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023552049.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 300aa    MW: 34062.6 Da    PI: 7.9885
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023552049.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.81.2e-5091341128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrF Ptdeel+v+yL++kv+g++++l   i+e+d+yk++Pw Lp k+  +ekewyfFs+rd+ky++g+r+nr++ +gyWkatg+dk + s 
  XP_023552049.1   9 LPPGFRFFPTDEELLVQYLCRKVAGHHFSL-PLIAEIDLYKFDPWVLPGKALFGEKEWYFFSPRDRKYPNGSRPNRVAGTGYWKATGTDKIISS- 101
                     79*************************999.78***************8777899*********************************999998. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g++vg+kk Lvfy g+apkg+kt+W+mheyrl
  XP_023552049.1 102 EGKNVGIKKALVFYIGKAPKGTKTNWIMHEYRL 134
                     999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MDPLTQLILP PGFRFFPTDE ELLVQYLCRK VAGHHFSLPL IAEIDLYKFD PWVLPGKALF  60
GEKEWYFFSP RDRKYPNGSR PNRVAGTGYW KATGTDKIIS SEGKNVGIKK ALVFYIGKAP  120
KGTKTNWIMH EYRLIASSRK IGSSKLDDWV LCRIYKKNSS CQKPTGSISS KEYSNSSPSS  180
ASSHIDEVIE SLPEMGENFF TYPKTTLPQN DFNMFNFEIP ADSVNSGWES LAGLHSVPEL  240
VPVDHTETFD YKHNNYNTNL YVPSITTPCF QLDYPPPPPL PTFQYPTHHR DGSGVFGFRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-110NAC family protein