PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023551843.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 742aa MW: 82078.3 Da PI: 4.9275

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023551843.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.3	0.00031	561	598	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R++i +++ eLr ++P+ a K s + L ++++Y+ Lq XP_023551843.1 561 RQQIQDRLKELRGIIPSgA------KCSIDSLLDRTIKYMLFLQ 598 89*************77......7777779******9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 742 aa Download sequence
MAETELGSVL NRICSTNHWS YGVFWSFDRR NSMVLTLEDI WYEEQVGLVA ANMLQQVHML 60 GEGAIGTAAF TGKHRWMFSD ASFGEWNPSM FEDNMEFQQQ FSCGIKTVAV IPVHPHGVIQ 120 LGSTHKIWES FEFLADAKRS LCQVINGGGH LQEKTMPMAL SADIFHFNEL FTSFIMSSNS 180 DDWSLGAVHN NSRTDFAGKS YASIDKQPAV LASSKPMPTS NIREQDAQYP SYLDADMLDS 240 CRNLVEYGHH SSKIATVSSG TGSLCMDNVQ QSARFPVIEG ELVESMTSRP DFCDEHLSED 300 FTMDLPDISL IDDLFQWFDS SPENGTNGAT TAVNDNLPQS TGVSTLSSNL VEVCKFVDGS 360 SKTSVVSARS CITNASQSSE QDNTIITQGA KDRLFDSLGL GTEGHESYSG GCNSMSTCSS 420 KLATGSTDHP RKRLFWELGI EELLDGRSNT SSTTKSSVEN HQSIASRRSK MERSLFETNP 480 IQLLDPCTNV NPIQSSGTAD RFPCKKEAIP KSPVSSWIDD SYSTNIGGSI LELSRKREEP 540 VKTCKKRARP GESNRPRPKD RQQIQDRLKE LRGIIPSGAK CSIDSLLDRT IKYMLFLQSV 600 TKYADKLKET HEPKLIDQDD GVAVNDKCTT ERGGGGVTWA YKVGTTPIVC PVIVEDLSSP 660 GQMLIEMLCE ERGFFLEIAD MIRGYGLTIL KGMMEVREDK IWAQFVVEVK LNTNQSITRI 720 NVFLSLMELL QQANISGADL AS

Sequence ? help Back to Top

Protein Sequence Length: 742 aa Download sequence

MAETELGSVL NRICSTNHWS YGVFWSFDRR NSMVLTLEDI WYEEQVGLVA ANMLQQVHML  60
GEGAIGTAAF TGKHRWMFSD ASFGEWNPSM FEDNMEFQQQ FSCGIKTVAV IPVHPHGVIQ  120
LGSTHKIWES FEFLADAKRS LCQVINGGGH LQEKTMPMAL SADIFHFNEL FTSFIMSSNS  180
DDWSLGAVHN NSRTDFAGKS YASIDKQPAV LASSKPMPTS NIREQDAQYP SYLDADMLDS  240
CRNLVEYGHH SSKIATVSSG TGSLCMDNVQ QSARFPVIEG ELVESMTSRP DFCDEHLSED  300
FTMDLPDISL IDDLFQWFDS SPENGTNGAT TAVNDNLPQS TGVSTLSSNL VEVCKFVDGS  360
SKTSVVSARS CITNASQSSE QDNTIITQGA KDRLFDSLGL GTEGHESYSG GCNSMSTCSS  420
KLATGSTDHP RKRLFWELGI EELLDGRSNT SSTTKSSVEN HQSIASRRSK MERSLFETNP  480
IQLLDPCTNV NPIQSSGTAD RFPCKKEAIP KSPVSSWIDD SYSTNIGGSI LELSRKREEP  540
VKTCKKRARP GESNRPRPKD RQQIQDRLKE LRGIIPSGAK CSIDSLLDRT IKYMLFLQSV  600
TKYADKLKET HEPKLIDQDD GVAVNDKCTT ERGGGGVTWA YKVGTTPIVC PVIVEDLSSP  660
GQMLIEMLCE ERGFFLEIAD MIRGYGLTIL KGMMEVREDK IWAQFVVEVK LNTNQSITRI  720
NVFLSLMELL QQANISGADL AS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	2e-48	bHLH family protein