PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023551271.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family B3
Protein Properties Length: 276aa    MW: 31068.2 Da    PI: 6.3096
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023551271.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.84.7e-1982183196
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TT..HHHHHHHHT--TT-EEEEEE-SS. CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkG..WkeFvkangLkegDfvvFkldgr. 87 
                     f+k+l++sdv++++r++lpkk ae+h   ++++e++ +t+ d++g  +W++k+++  +++s++yvl++   + +Fv+a+gL+ gDf++ +  ++ 
  XP_023551271.1  82 FEKELKNSDVSSLRRMILPKKAAETHlpALDSKEGIIITMDDLDGlHVWSFKYRFwpNNNSRMYVLENTviTGDFVNAHGLQLGDFIMVY--QDy 174
                     99**************************7778899**********9*******9989999999***96533799**************99..666 PP

                     SEE..EEEE CS
              B3  88 sefelvvkv 96 
                     ++ ++v+++
  XP_023551271.1 175 ENLNYVIQA 183
                     777777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MPFLDYQPPP PPPPPPPPPP PPPHDLAAAV PAFAASLHRK KRMPRHRRRS SSNLHFSFPS  60
SSAPLLPPPP RVIDPRRLKF LFEKELKNSD VSSLRRMILP KKAAETHLPA LDSKEGIIIT  120
MDDLDGLHVW SFKYRFWPNN NSRMYVLENT VITGDFVNAH GLQLGDFIMV YQDYENLNYV  180
IQAKKASDQE MYTGIGTNVV INGDIVFHDY DPNKVGNSIY VPSPTMDVSS FIYDTSSAFD  240
NDSTFDFMSG SVTNYSRMGG LEGFGSVENL SLDEFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.16e-81B3 family protein