PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023550779.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 199aa MW: 22248.4 Da PI: 9.5903 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 20 | 1.2e-06 | 105 | 144 | 11 | 55 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rR +r+ +++ L++l+ + +K + a++L++A+ YIk q XP_023550779.1 105 RRSQRLSDKITALQKLVSPY-----GKTDTASVLQEACLYIKFVQ 144 7889**************99.....9****************877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MDVPSQVVNN YGFCLESKLF NNDGQLKGEG FTIPCQHPLT YQPGCNASKS MTENVSPQSV 60 LFTKKISFLQ NESHAKKREF FAQKGVQAAP YDLAGDNKRM KEPARRSQRL SDKITALQKL 120 VSPYGKTDTA SVLQEACLYI KFVQEHIQNL LQMQSSSYKN LNPQGTQQKQ GNLRSEGLCV 180 VPVTFTQKIA LNKDINLVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31730.1 | 3e-21 | bHLH family protein |