PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023549824.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 347aa    MW: 38682.3 Da    PI: 10.3748
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023549824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.8e-13168214354
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++h+++E+rRRdriN  +++Lr+l+Pk+      K++Ka+ L  A++ +k+L
  XP_023549824.1 168 KSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSAIDQVKDL 214
                     79*************************8.....7*************99988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MECKVLGSIF SLHNGNIQSW RLSFIRGKNG NFKLKRQPYT AKNDFRFDEL KAIGHHTNHH  60
QDIKITHIII IIVVISAINS SSPDATIKTK LRDGFKKTGP ASPSASVMED NWDKPEGLDS  120
SPEPSLRLPW MINPQPSSST ELRIDGFPSF STPVEGIIGE DRAASASKSH SQAEKRRRDR  180
INAQLATLRK LIPKSDKMDK AALLGSAIDQ VKDLKRKAME ASKNMTVPTD MDEVTIDSTM  240
VEDHSRNNIE IKVSVSCDDR PELFTELIQV IKGLRLTTIR ADMASVGGRI KSILVLGNKD  300
GEKSVCLNTV QQSLKLVLSR LSSSSSASTY RIRSKRQRFF LPSHYSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.15e-47bHLH family protein