PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023549713.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 294aa MW: 33381.7 Da PI: 6.5754

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023549713.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.4	1e-07	243	276	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++ +L +++gL+ +q+ +WF N+R + XP_023549713.1 243 KWPYPTEDDKSKLVEETGLQLKQINNWFINQRKR 276 469*****************************87 PP
2	ELK	25.5	3.1e-09	197	218	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ XP_023549713.1 197 ELKIELKQGFKSRIEDVREEIL 218 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
MQEAGLGIMN AGVSSGDVLV SGEGVHNAQL KAEIATHPLY EQLLSAHVAC LRVATPIDKL 60 PMIDAQLSQS HHVLRSYASS HQNAHSLSPH DRQELDNFLA QYMIVLCSFK DQLQQHVRFH 120 AVEAVMACRE IESTLQALTG VNLDEGTGLT MSDNDDDDVP MDFALDQSST DAHDMMGFGP 180 LLPTESERSL MERVRQELKI ELKQGFKSRI EDVREEILRK RRAGKLPGDT TTVLKNWWQQ 240 HSKWPYPTED DKSKLVEETG LQLKQINNWF INQRKRNWHS NSQSVTFLKS KRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	274	294	RKRNWHSNSQSVTFLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-165	TALE family protein