PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023549664.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 280aa MW: 30067.9 Da PI: 8.9679

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023549664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.8	6.6e-40	60	120	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ke+al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ss XP_023549664.1 60 KEQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKSCRRYWTEGGSLRNVPVGGGSRKNKRSS 120 7899******************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MDTPPWPQFA GGGVVVKQME GGESSSSSKA GNININNVNI NINNNNNNGN LLERKARPQK 60 EQALNCPRCN STNTKFCYYN NYSLSQPRYF CKSCRRYWTE GGSLRNVPVG GGSRKNKRSS 120 LSAPVDKKIN GSDQNPKMIH HAHQDLNLAI FPPNNNNPIS SPSSTTSSSH LFGSFMAPPP 180 PPPPAASAAG VFNGAGGFGF NELKPSSLSF SLDGFESGGG YGNHHHHQDH QDQTAVMFPI 240 QDLKQSNGSD EFEQNRGGGR HGGDNSSGGF WNGMLGGGSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24060.1	2e-41	Dof family protein