PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023549655.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 429aa MW: 48089.2 Da PI: 8.3367

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023549655.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.9	7.2e-16	39	83	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rW +eE++++++a k++G + W+ I +++g ++t+ q++s+ qk+ XP_023549655.1 39 RERWKEEEHDKFIEALKLYGRD-WRQIEEHVG-TKTAVQIRSHAQKF 83 78****************77.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MNSAVYESTV TPDQHSSANV QLKEFAPKAR KPYTITKQRE RWKEEEHDKF IEALKLYGRD 60 WRQIEEHVGT KTAVQIRSHA QKFFSKVTRN STGCSTNLVG CIEIPPPRPK RKPAHPYPRK 120 EVAHSHKLSS ISEQTRSLSP QLSDKECQSP TSTVVAATSG SDTLMLANSR IHHDSASPDS 180 SVPSSLDNES PTAAAPVPEN STLHEKTSKN LELFAKDDIH EKDDSTKEPS LQSLKLFGRT 240 VLISDPHKQT PPIETCSSRA DSKPGENQKQ ISPRKSPTRN PESTWNHGAF YFIQRNSVDS 300 NQGAGSTVPV SWWSSYNSYP LSFVHCFNQA HSNPSREVDD REAHKDQSWC GSNTGSLNSG 360 ENDIQSSSSR VFQSRDEMIG KALSCELISS HEKNTKGFVP YKRCMTERAT QSHTITDTER 420 EEKRIRLCL

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MNSAVYESTV TPDQHSSANV QLKEFAPKAR KPYTITKQRE RWKEEEHDKF IEALKLYGRD  60
WRQIEEHVGT KTAVQIRSHA QKFFSKVTRN STGCSTNLVG CIEIPPPRPK RKPAHPYPRK  120
EVAHSHKLSS ISEQTRSLSP QLSDKECQSP TSTVVAATSG SDTLMLANSR IHHDSASPDS  180
SVPSSLDNES PTAAAPVPEN STLHEKTSKN LELFAKDDIH EKDDSTKEPS LQSLKLFGRT  240
VLISDPHKQT PPIETCSSRA DSKPGENQKQ ISPRKSPTRN PESTWNHGAF YFIQRNSVDS  300
NQGAGSTVPV SWWSSYNSYP LSFVHCFNQA HSNPSREVDD REAHKDQSWC GSNTGSLNSG  360
ENDIQSSSSR VFQSRDEMIG KALSCELISS HEKNTKGFVP YKRCMTERAT QSHTITDTER  420
EEKRIRLCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	2e-46	MYB_related family protein