PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023549654.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 440aa MW: 49138.4 Da PI: 8.2798

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023549654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.9	7.5e-16	50	94	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rW +eE++++++a k++G + W+ I +++g ++t+ q++s+ qk+ XP_023549654.1 50 RERWKEEEHDKFIEALKLYGRD-WRQIEEHVG-TKTAVQIRSHAQKF 94 78****************77.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MNTGGGLCSN NMNSAVYEST VTPDQHSSAN VQLKEFAPKA RKPYTITKQR ERWKEEEHDK 60 FIEALKLYGR DWRQIEEHVG TKTAVQIRSH AQKFFSKVTR NSTGCSTNLV GCIEIPPPRP 120 KRKPAHPYPR KEVAHSHKLS SISEQTRSLS PQLSDKECQS PTSTVVAATS GSDTLMLANS 180 RIHHDSASPD SSVPSSLDNE SPTAAAPVPE NSTLHEKTSK NLELFAKDDI HEKDDSTKEP 240 SLQSLKLFGR TVLISDPHKQ TPPIETCSSR ADSKPGENQK QISPRKSPTR NPESTWNHGA 300 FYFIQRNSVD SNQGAGSTVP VSWWSSYNSY PLSFVHCFNQ AHSNPSREVD DREAHKDQSW 360 CGSNTGSLNS GENDIQSSSS RVFQSRDEMI GKALSCELIS SHEKNTKGFV PYKRCMTERA 420 TQSHTITDTE REEKRIRLCL

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MNTGGGLCSN NMNSAVYEST VTPDQHSSAN VQLKEFAPKA RKPYTITKQR ERWKEEEHDK  60
FIEALKLYGR DWRQIEEHVG TKTAVQIRSH AQKFFSKVTR NSTGCSTNLV GCIEIPPPRP  120
KRKPAHPYPR KEVAHSHKLS SISEQTRSLS PQLSDKECQS PTSTVVAATS GSDTLMLANS  180
RIHHDSASPD SSVPSSLDNE SPTAAAPVPE NSTLHEKTSK NLELFAKDDI HEKDDSTKEP  240
SLQSLKLFGR TVLISDPHKQ TPPIETCSSR ADSKPGENQK QISPRKSPTR NPESTWNHGA  300
FYFIQRNSVD SNQGAGSTVP VSWWSSYNSY PLSFVHCFNQ AHSNPSREVD DREAHKDQSW  360
CGSNTGSLNS GENDIQSSSS RVFQSRDEMI GKALSCELIS SHEKNTKGFV PYKRCMTERA  420
TQSHTITDTE REEKRIRLCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	1e-46	MYB_related family protein