PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023549385.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 312aa MW: 35786 Da PI: 5.9283 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.9 | 6.5e-15 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++ G g+W+ Iar g+ R++k+c++rw +yl XP_023549385.1 17 KGLWSPEEDEKLMRYMLSNGQGCWTDIARNAGLLRCGKSCRLRWINYL 64 678*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 44.7 | 3e-14 | 70 | 113 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E+ l+++++ +lG++ W+ Ia++++ gRt++++k+ w++ XP_023549385.1 70 RGAFSPQEERLILHLHSLLGNR-WSQIAARLP-GRTDNEIKNLWNS 113 89********************.*********.*********9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MRKPDSAAAA ANIRLKKGLW SPEEDEKLMR YMLSNGQGCW TDIARNAGLL RCGKSCRLRW 60 INYLRPDLKR GAFSPQEERL ILHLHSLLGN RWSQIAARLP GRTDNEIKNL WNSSLKKRLK 120 NHSNISSPNP SESSELRSSN SFGELTENII PTHEHNNIMN MFMESSSFSS STSKSTPSLF 180 LQNYIPCDPF PTLLDNHQYN RVGGAMEEGY YGDYSRTIFE PRGLVRDNYD FSHLPPLGNG 240 DIIEEIKVPS INIKENNENN IQEFNNDYFD YNNQMNFKAE GIFGNNYQAE LQDNLKIGGW 300 DLDGFILDFQ MD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G08500.1 | 4e-69 | MYB family protein |