PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023549025.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 558aa MW: 62983.2 Da PI: 4.6518

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023549025.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	156.2	1.5e-48	17	143	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ppGfrFhPtdeelv +yLk kv ++kl+l ++i+e+d+yk+eP +Lp + k+k+++++w+fFs+r+++y++ +r +rat++g Wk tgkd+ ++ XP_023549025.1 17 PPGFRFHPTDEELVLYYLKFKVCRRKLKL-DIIREIDVYKWEPGELPgQsKLKTGDRQWFFFSPRERRYPNASRLSRATRNGHWKVTGKDRIIKY 110 8**************************.99**********963589999**********************************99 PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++vg+kktLvfy+grap+ge+tdWvmhey+l XP_023549025.1 111 -NSRNVGVKKTLVFYQGRAPNGERTDWVMHEYTL 143 .999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MSTVSSSMGL CDEGDWPPGF RFHPTDEELV LYYLKFKVCR RKLKLDIIRE IDVYKWEPGE 60 LPGQSKLKTG DRQWFFFSPR ERRYPNASRL SRATRNGHWK VTGKDRIIKY NSRNVGVKKT 120 LVFYQGRAPN GERTDWVMHE YTLDEDELKR CKNVKDYYAL YKLYKKSGPG PKNGEQYGAP 180 FKEENWNDGE CQVLVHSDAQ EPQVNILDEV TSVDRERANV QIQLSSDDIE ELLQQFTNDP 240 VLELPSVSGI HQFDSVVQVD DKEETASTMI DTYSQNHILP EADKVLNLSG QPSDLHPCFQ 300 FTQAGLFQLQ SFESEVSSSP KYREEEDFLE IDDLIGPEPT LVANVNPLGN SEFDGLNELE 360 LFHDANMFLR DLGPVVPETF LDPYLSADGG ILVANDVNGH LQYDQMGNGF WENETENSFS 420 FPEPHQQFGT QPNLGVGYES VSSAAPEIRD NQIANGGGSS ASKFSSNLWA FVESIPTTPA 480 SASENVNRTF QRMSSFSRLR LNTLNTFNAN VAIGNPKTSA RRTGTNKGFF LFSILGVLCA 540 ILWVLLGDVR LQERGIAS

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MSTVSSSMGL CDEGDWPPGF RFHPTDEELV LYYLKFKVCR RKLKLDIIRE IDVYKWEPGE  60
LPGQSKLKTG DRQWFFFSPR ERRYPNASRL SRATRNGHWK VTGKDRIIKY NSRNVGVKKT  120
LVFYQGRAPN GERTDWVMHE YTLDEDELKR CKNVKDYYAL YKLYKKSGPG PKNGEQYGAP  180
FKEENWNDGE CQVLVHSDAQ EPQVNILDEV TSVDRERANV QIQLSSDDIE ELLQQFTNDP  240
VLELPSVSGI HQFDSVVQVD DKEETASTMI DTYSQNHILP EADKVLNLSG QPSDLHPCFQ  300
FTQAGLFQLQ SFESEVSSSP KYREEEDFLE IDDLIGPEPT LVANVNPLGN SEFDGLNELE  360
LFHDANMFLR DLGPVVPETF LDPYLSADGG ILVANDVNGH LQYDQMGNGF WENETENSFS  420
FPEPHQQFGT QPNLGVGYES VSSAAPEIRD NQIANGGGSS ASKFSSNLWA FVESIPTTPA  480
SASENVNRTF QRMSSFSRLR LNTLNTFNAN VAIGNPKTSA RRTGTNKGFF LFSILGVLCA  540
ILWVLLGDVR LQERGIAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-123	NAC family protein