PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023549007.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 309aa    MW: 32490.6 Da    PI: 6.517
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023549007.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66e-10158202554
                     HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     h+++Er RR+ri +++  L+el+P+ +      K++ a++L + v+Y+k L
  XP_023549007.1 158 HSIAERLRRERIAERIRALQELVPSvN------KMDRAAMLDEIVDYVKFL 202
                     99***********************55......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MANNHSETPS DDFLEQILGI SPFGSAEQGL AGTDGGLAGA AAAAAHGQAP MMLQLSSGDG  60
GGHISTIGSG SVGGAGFHGG TPFPLGLSLD QGKSGFLKAE EASGSGKRYC GEVVDVRASS  120
VKNVYQGQQM HATMGAAPHP PTMRPRVRAR RGQATDPHSI AERLRRERIA ERIRALQELV  180
PSVNKMDRAA MLDEIVDYVK FLRLQVKVLS MSRLGGAGAV APLVTDIPLS SVEEEGSEGG  240
RNQPAWEKWS NDGTERQVAK LMEENVGSAM QFLQSKALCI MPISLASAIY HTQPPDSSSV  300
VKPESNPPP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163168RLRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02590.21e-109bHLH family protein