PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023548780.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 270aa MW: 30719.5 Da PI: 5.0646 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.4 | 6.9e-18 | 19 | 66 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd l ++++ +G g+W+++ar+ g++Rt+k+c++rw++yl XP_023548780.1 19 KGPWTVEEDAVLFNYIHSHGEGRWNAVARCTGLKRTGKSCRLRWLNYL 66 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 47.7 | 3.7e-15 | 72 | 115 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l++d++ ++G++ W++Ia++++ gRt++++k++w++ XP_023548780.1 72 RGNITLQEQLLILDLHFRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 115 7899******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MDVKMRGFTA EEAEEGVRKG PWTVEEDAVL FNYIHSHGEG RWNAVARCTG LKRTGKSCRL 60 RWLNYLRPSV KRGNITLQEQ LLILDLHFRW GNRWSKIAQY LPGRTDNEIK NYWRTRVQKQ 120 AKQLKCDVNS KQFRDAMRYV WMPRLLERIQ ASTDSVTDVV STSTDVVPSL EQTQPSPSRC 180 SSVNPHVTPS TSSSDSVSNK VQLQVFPVSD VTEDFSLVGT SEEEGMMMVV QQGCDGEATN 240 GWIGGGELLE DGFWDGEDMW FLLEQFGDDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47190.1 | 9e-81 | MYB family protein |