PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023548704.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 282aa MW: 32270.8 Da PI: 5.1108 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.1 | 3.6e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEd++l+++++ G g+Wk+ ++ g+ R++k+c++rw +yl XP_023548704.1 14 RGRWTAEEDDKLKKYIEANGEGSWKSLPKNAGLLRCGKSCRLRWINYL 61 8*******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 55.5 | 1.3e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++Ede ++++++ lG++ W++Ia +++ gRt++++k++w+++l XP_023548704.1 67 RGNITPQEDETILKLHTTLGNR-WSLIAGHLP-GRTDNEIKNYWNSHL 112 7999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 282 aa Download sequence |
MGKTPCCAKE GLRRGRWTAE EDDKLKKYIE ANGEGSWKSL PKNAGLLRCG KSCRLRWINY 60 LRTDLKRGNI TPQEDETILK LHTTLGNRWS LIAGHLPGRT DNEIKNYWNS HLSKKLYSSP 120 KKNSGIPKRT TSSRRGQQPS SIKLSILQKK NMKKAIPKEE GAQPNSIPEG PETSKPNQEE 180 EEEEEEEEEE EQATTTTSRL DCDDEEKKLE THNSTMKDPK LEEENWDLGS CEFTADAEKR 240 GNGFTIVESV EWCYSAWPSS MNSSFNNNEW LNWEWEDDGV LG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 1e-68 | MYB family protein |