PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023548633.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 653aa MW: 72091.3 Da PI: 6.0921 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.7 | 0.0005 | 485 | 522 | 13 | 55 |
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLrel+P+ a K s + Le++++++ Lq XP_023548633.1 485 RQLIQDRIKELRELVPNgA------KCSIDSLLERTIKHMLFLQ 522 67799************77......7777779999999999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 653 aa Download sequence |
MGTADLHQIL KSFCFNSEWK YAVFWKLKHR ARMMLTWEDG YYDNSEQYEP STSKFYRKTL 60 EKFHDGHYSH DPLGLAVAKM SYHVYSLGEG IVGQVAVTGK HQWITADEQI PNISSTLEYC 120 DGWQTQFLAG IKTIVVVAVV PHGVLQLGSL DKVTEDVNVV AHIRNVFLTL QESSAGHIEP 180 MPSCKSSGYM KSEDESVSKN VGIELSGSGG NESLRTQPDA INVESFKSKA RLLDDRICGG 240 EPSGYKDMAV DLKQKCNAPS QNTAMDITND ACFPVNHNAM LSRTNPTEMY LQNDVEASED 300 GCPSNTSLKF PAGYELHEVL GPAFLKDALH LDWQTEYVFG GRASNLSEGM SSSQLTSDSP 360 MEHLLEAVVA DVCYSGSDVK SDTSLCKSGQ SLLTSERIPE PSTNVTTSAC SEGYSMGQSR 420 TSFIGEDMPN SLSSSGICGV MSPKGFSSTY SGTGSERLEK SSEPGKNSKR RARPGESCRP 480 RPRDRQLIQD RIKELRELVP NGAKCSIDSL LERTIKHMLF LQGITKHVDK LNKCANMKLH 540 QKENGRMGTS NTDQGSSWAV EVGGQLKVCS IIVENLNKNG QILVEMLCEE CSHFLEIAEA 600 IRSLGLTILK GITEAHGDKT WICFVVEGEN NRNIHRMDIL WSLVQILQRS NTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31280.1 | 1e-103 | bHLH family protein |