PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023548609.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 407aa MW: 44835.9 Da PI: 7.2494

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023548609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.1	1.2e-51	26	154	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kk++ ++++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_023548609.1 26 VPPGFRFHPTEEELLHYYLRKKLSFHTVDL-DVIPDVDLNKLEPWDIQEKCKIgttPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 119 69*************************9.99**********964444222455******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++ +g++ktLvfykgrap+g+k+dW+mheyrl XP_023548609.1 120 YT-NSRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 154 .9999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MPTPLCFQTK TSHTQMSISV NGHSQVPPGF RFHPTEEELL HYYLRKKLSF HTVDLDVIPD 60 VDLNKLEPWD IQEKCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIY 120 TNSRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDEISTS QSSNIKASTS GVIGDGGQEE 180 GWVVCRIFKK KNHHKTLDSP VSTTITETPS SLLLDSCNDG ALEQIFHYMG RSCKDIEDGD 240 GGGGGGRLLS PIDTSTGGSY LDGRFSKLPN LESPNSTSTH NCHQPINNHV GPTDPILISG 300 YQLESSSATA AAATAPHNWA AFDRLVASQL NGQIEVSNMI YYNDQLPTPP TLRGTTSFSS 360 KSSSSSYTAA AGQDYNNVDT ELWSFAKLSS SLSSSSDPLC HVSNTPI

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MPTPLCFQTK TSHTQMSISV NGHSQVPPGF RFHPTEEELL HYYLRKKLSF HTVDLDVIPD  60
VDLNKLEPWD IQEKCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIY  120
TNSRRIGMRK TLVFYKGRAP HGQKSDWIMH EYRLDEISTS QSSNIKASTS GVIGDGGQEE  180
GWVVCRIFKK KNHHKTLDSP VSTTITETPS SLLLDSCNDG ALEQIFHYMG RSCKDIEDGD  240
GGGGGGRLLS PIDTSTGGSY LDGRFSKLPN LESPNSTSTH NCHQPINNHV GPTDPILISG  300
YQLESSSATA AAATAPHNWA AFDRLVASQL NGQIEVSNMI YYNDQLPTPP TLRGTTSFSS  360
KSSSSSYTAA AGQDYNNVDT ELWSFAKLSS SLSSSSDPLC HVSNTPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-118	NAC family protein