PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023548445.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 596aa MW: 66603.9 Da PI: 6.1727

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023548445.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.4e-09	424	461	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ +L++++gLt +qV +WF N R + XP_023548445.1 424 FEHflHPYPKDSEKLKLSRQTGLTRNQVANWFINARVR 461 664459******************************88 PP
2	BELL	93.9	1.5e-30	288	359	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erq+l++k +kLlsll eVd+rYkqy+e lq + ssF++vag g+a+ Yt+lA ++iS hFr L+dai qi XP_023548445.1 288 ERQDLKNKNSKLLSLLGEVDRRYKQYYEHLQLLSSSFDTVAGRGAAEFYTALAHQTISCHFRRLQDAINAQI 359 799******************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MARAMWRGGS SEDQLAVMFG DTFLQAMLVQ AFRRSIVIVG EGPLAANDGG WMRRSVIQIK 60 NCLFPGLSNQ RDSMLGDDQK LGCSSQEQPL CSGNLMMFMK NQDPSCRDYS EVFSGVSSNY 120 VESVGDRSNG EMIFIPPVVG ILDDPSFQCQ GVSLSLSTHS PSVVSMSSFP HQYQNPAMAS 180 SFINASSSIF EKRPNPKPYN GMHIVAGSGN STLNLVYVEA AQQVLDEMVS IREALKELKS 240 RKLKGSSGLG VDFCRENDGG CNDMNGEICS GSRESLIANS SGDLSPTERQ DLKNKNSKLL 300 SLLGEVDRRY KQYYEHLQLL SSSFDTVAGR GAAEFYTALA HQTISCHFRR LQDAINAQIE 360 VTRRTLGEQD ASHFVQEGIP RLRFVDQHLR QQRALQQLGV TPHSWRPQRG LPESSVSILR 420 AWLFEHFLHP YPKDSEKLKL SRQTGLTRNQ VANWFINARV RLWKPMVEEM YKEEFGDSNM 480 DIKSSPENAS KASWNNSLFS EDRGGDELHE LHEQVLYRSC STNDMIKSTN FSIGGDVSLA 540 LELKHCEGDE FGMFGSSTNR MVGSVELESQ DLPCLEPERH HQCRLTSSTM LHDFVV

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MARAMWRGGS SEDQLAVMFG DTFLQAMLVQ AFRRSIVIVG EGPLAANDGG WMRRSVIQIK  60
NCLFPGLSNQ RDSMLGDDQK LGCSSQEQPL CSGNLMMFMK NQDPSCRDYS EVFSGVSSNY  120
VESVGDRSNG EMIFIPPVVG ILDDPSFQCQ GVSLSLSTHS PSVVSMSSFP HQYQNPAMAS  180
SFINASSSIF EKRPNPKPYN GMHIVAGSGN STLNLVYVEA AQQVLDEMVS IREALKELKS  240
RKLKGSSGLG VDFCRENDGG CNDMNGEICS GSRESLIANS SGDLSPTERQ DLKNKNSKLL  300
SLLGEVDRRY KQYYEHLQLL SSSFDTVAGR GAAEFYTALA HQTISCHFRR LQDAINAQIE  360
VTRRTLGEQD ASHFVQEGIP RLRFVDQHLR QQRALQQLGV TPHSWRPQRG LPESSVSILR  420
AWLFEHFLHP YPKDSEKLKL SRQTGLTRNQ VANWFINARV RLWKPMVEEM YKEEFGDSNM  480
DIKSSPENAS KASWNNSLFS EDRGGDELHE LHEQVLYRSC STNDMIKSTN FSIGGDVSLA  540
LELKHCEGDE FGMFGSSTNR MVGSVELESQ DLPCLEPERH HQCRLTSSTM LHDFVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34610.2	1e-86	TALE family protein