PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023548439.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 223aa MW: 24641.6 Da PI: 9.7131 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 13.3 | 0.00016 | 121 | 159 | 12 | 55 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +++ + +K + a++L +A+ YI+ Lq XP_023548439.1 121 RKEKLVDRITALHQIVSPF-----GKTDTASVLSEAIGYIRFLQ 159 6677778899999999887.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MGGNPNWWTT SLAEQPQTWS QFVIGEEHRV FNQTQMTHYH PTKLENFQHQ IFNNNPNFAH 60 FSCNTNNPHH GSNRVVSGGG SGAPDPDRSL ESNRSAVVGG GACKKARVHP PSSTQPPLKV 120 RKEKLVDRIT ALHQIVSPFG KTDTASVLSE AIGYIRFLQG QIEALSYPYQ RSAPKELTNS 180 QPLGDERKRQ EKPLKELRSR GLCLVPLSCT HLVGAGTTYG TGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G29100.1 | 2e-41 | bHLH family protein |