PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547764.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 355aa    MW: 39130.4 Da    PI: 6.0483
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547764.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.35.6e-08259299954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r+RR+ri +++  L++++P        K++ a++L +A +Y+k L
  XP_023547764.1 259 ARQRRERISERIRVLQRIVPGG-----SKMDTASMLDEAANYLKFL 299
                     69******************95.....5****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MDHLSWDGYG SRATTNTPPP SSSSFWSNFQ QGHEQRFMMS NNSNSLNFFN SVQDLPTSNM  60
DVVGLETQLL PSFNGDKTAT ATAATAATCS LESLDCLLSA TNSNTDTSIE DDGSVSMMLS  120
DYTNLWNFGG NAAPSSKRSH DQTHIKPTEY SVFSNNIITL SDSTSNSEGF KIITDQNLPK  180
QKKPRSEKPP NSSNINFQQS CSSGSSCIDQ EPDPEAIAQM KEMIYRAAAF RPVNLGLEAI  240
EKPKRKNVRI STDPQTVAAR QRRERISERI RVLQRIVPGG SKMDTASMLD EAANYLKFLK  300
SQIKALENLG QKIESLNCPS NTIAFSFNPS FPIQTSSSSS SHNNFSLQNP YDQLM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1260265RQRRER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21330.15e-69bHLH family protein