PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023547276.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 381aa MW: 42801.7 Da PI: 6.4596

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023547276.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.3	3e-09	301	337	19	55
HHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 19 FeknrypsaeereeLAkklgLterqVkvWFqNrRake 55 +k +yps++e+ LA+++gL+++q+ +WF N+R ++ XP_023547276.1 301 HNKWPYPSEAEKLALAESTGLDQKQINNWFINQRKRH 337 34679*****************************885 PP
2	ELK	36	1.6e-12	257	278	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK++Ll+KYsgyL+sLkqE+s XP_023547276.1 257 ELKNHLLKKYSGYLSSLKQELS 278 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MEDQYNPHGD SSRGNFLFTS VPVLATNSSS PGGNFVTRHS SSNGGGSSIL GSQIMAVNTN 60 LGGDCNFPAS DLVVKVEPSG SQSQNYHQVH DFHYHLMREF QISSGGNNSN DLDSMKAKII 120 SHSLFSNLLQ AFLDCQKVGA PPEVAAKLSS VGEEFERRRS SMASTGGSTD PELDHFMEAY 180 YGMLVKYREE LTRPIREAAD FMHTIEFQLN TLCNASFQIL ASAATEEKGW SEEEQEKSRE 240 AEREVGDQMD PRAAERELKN HLLKKYSGYL SSLKQELSKK KKKGKLPKDA RQELLRWWEL 300 HNKWPYPSEA EKLALAESTG LDQKQINNWF INQRKRHWKP SEDVQFMGME GFYHPNAAAA 360 AAAAFYFDGH FMGDSHYRLG P

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MEDQYNPHGD SSRGNFLFTS VPVLATNSSS PGGNFVTRHS SSNGGGSSIL GSQIMAVNTN  60
LGGDCNFPAS DLVVKVEPSG SQSQNYHQVH DFHYHLMREF QISSGGNNSN DLDSMKAKII  120
SHSLFSNLLQ AFLDCQKVGA PPEVAAKLSS VGEEFERRRS SMASTGGSTD PELDHFMEAY  180
YGMLVKYREE LTRPIREAAD FMHTIEFQLN TLCNASFQIL ASAATEEKGW SEEEQEKSRE  240
AEREVGDQMD PRAAERELKN HLLKKYSGYL SSLKQELSKK KKKGKLPKDA RQELLRWWEL  300
HNKWPYPSEA EKLALAESTG LDQKQINNWF INQRKRHWKP SEDVQFMGME GFYHPNAAAA  360
AAAAFYFDGH FMGDSHYRLG P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G08150.1	2e-93	TALE family protein