PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023547213.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

DBB

Protein Properties

Length: 278aa MW: 29868.9 Da PI: 6.3482

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023547213.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.4	5.8e-08	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +e+ e+ fC+ ++ lC+ C H+ H+ XP_023547213.1 4 LCDVCENAEAVVFCTADEAALCNLCDHRVHNAnklaskHR 43 7*****************************7667777776 PP
2	zf-B_box	23.9	8.4e-08	54	95	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 e+++C+ + e + lfC++++ lC++C + +H+ H XP_023547213.1 54 EAPVCDVCRERRGFLFCQQDRAILCRECDDPIHSAneltmkH 95 6799*****9*******************655555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MKILCDVCEN AEAVVFCTAD EAALCNLCDH RVHNANKLAS KHRRFSLLRS DAAEAPVCDV 60 CRERRGFLFC QQDRAILCRE CDDPIHSANE LTMKHDRFLQ IGIKLSATAT LYEPPPSGEK 120 PIGSGGRVVS KSKLKGSVKK ADAISSAPTV CTTSVCVNAP TNLTPTTAVN EGGGGQIATE 180 DGGSASSISE YLMETLPGWP FEEFLEFEGV GFPFSSSEGL EPWVPRGPPA ALFGLKDTKA 240 LAVNSSKVNR VWTDDGFTVP QIINTAPSAG FKRSRPFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	3e-59	DBB family protein