PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023547022.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 100aa    MW: 11252.4 Da    PI: 7.7677
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023547022.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.41.4e-071257346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +W+    + + +a + + ++   +W   a+ +g g+t++++k ++ +
   XP_023547022.1 12 SWSSKQNKVFENALTVYDKDspdRWQNLASSVG-GKTAEEVKRHYEM 57
                     7********************************.***********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MTSSSSSSSS SSWSSKQNKV FENALTVYDK DSPDRWQNLA SSVGGKTAEE VKRHYEMLVE  60
DVHNIETGRV PLPNYSKPPK HYSSNTFLDE EQTLKGLKLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.22e-32MYB_related family protein