PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023546949.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 241aa MW: 27004.3 Da PI: 8.3348 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 46.9 | 5e-15 | 53 | 99 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h+e+ErrRR+riNs +++Lr+llP+ +K +Ka+ L ++v ++k+L XP_023546949.1 53 RSHKEAERRRRQRINSHLSTLRTLLPNT-----TKTDKASLLAEVVSHVKEL 99 78*************************9.....8****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MLPFQSHYEF QSSWLSYRDG DHFKRSMSTA GCSIVGNAAD SSKDEKKSTE ASRSHKEAER 60 RRRQRINSHL STLRTLLPNT TKTDKASLLA EVVSHVKELR RRATEVAHRS ADQCDGDGGK 120 VPWAFPSEED EATLCYCDNE NRLMRATVCC DERSGLNRDL IQAIRSVHAR VVRAEMMTLG 180 GRTKNVVVLE WSDGGDGGGR EEAFVGLRRA LKAVVENQAQ NLSGHKRARA CCPIEDPFYM 240 C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G25710.1 | 4e-35 | bHLH family protein |