PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023546197.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

bHLH

Protein Properties

Length: 338aa MW: 37997.9 Da PI: 4.5545

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023546197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.1	5.6e-12	174	217	6	54
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL A+eY+k+L XP_023546197.1 174 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTAILADAIEYMKEL 217 589*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MELDEHVFLE ELMALRRDSN WDAIPNELSD LCWNAWAFDY CFDQSGMNFH PNSSSEPLSA 60 QNLDEFYHPL GNEFSVTGMA DSAYAAMEVA AAPLPFQAER PNAEREGEGE GEEEEELGFL 120 ADEIQNMEVV QVQSACKMEP NQSPELPVFN IGTCSSIERK NRSKKLQGQP SKNLMAERRR 180 RKRLNDRLSM LRSIVPKISK MDRTAILADA IEYMKELLEK IGNLQREVDG SNPRTNSLNN 240 TKPSELVARN SPKFEVESRM GKTRIEICCA AKPGLILSTV NTIEALGLEI QQCVISSFND 300 FALQATCSSQ EIKQRTELKP EELKEALFRN SGYGGSCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	177	184	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	5e-75	bHLH family protein