PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546043.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 298aa    MW: 32539.3 Da    PI: 7.7026
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546043.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.11e-10181228455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_023546043.1 181 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 228
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MNPPTLMNDG SFPSNPNANA NITPYNLPEI WQFPINGGTG VDESEPGLAL RMAHLAHNLG  60
HFEEIAMGNP EVSSSVPMNL LLLQRLAHVR GVSKKRLDSD QDSPKLSSSS NGNNVSGNSG  120
AANDSGGKRL KSAACRDDKQ ESKTEAEPRS GKAGENSQPP PEKPKLDYIH VRARRGQATD  180
SHSLAERARR EKISERMKIL QDLVPGCNKV IGKALVLDEI INYIQSLQRQ VEFLSMKLEA  240
VNSRIGPGIE VFSPKDYGQQ TFDTTGTTFG SQATREYSRG SSPEWLHMQI GGSFERST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.19e-79bHLH family protein