PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023546040.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 329aa    MW: 36909.4 Da    PI: 7.1019
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023546040.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1661.3e-51261541128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     lppGfrFhPtdeel+ +yL+ kv + ++    v i+evd++++ePw+Lp ++k +ekewyfFs r +ky+tg r+nrat +gyWkatgkd++++s
  XP_023546040.1  26 LPPGFRFHPTDEELIAFYLASKVFKPSNFH-GVnIAEVDLNRCEPWELPDEAKMGEKEWYFFSLRVRKYPTGLRTNRATVAGYWKATGKDRQIHS 119
                     79*********************9988444.444***************989999***************************************9 PP

             NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + +g + g+kktLvfykg ap+g+kt+Wvmheyrl
  XP_023546040.1 120 SsNGVKLGTKKTLVFYKGGAPRGTKTKWVMHEYRL 154
                     878899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MFGIEEVIDE LNGEEADNAK ERHRLLPPGF RFHPTDEELI AFYLASKVFK PSNFHGVNIA  60
EVDLNRCEPW ELPDEAKMGE KEWYFFSLRV RKYPTGLRTN RATVAGYWKA TGKDRQIHSS  120
SNGVKLGTKK TLVFYKGGAP RGTKTKWVMH EYRLHSDLAS PNACKDEWVL CRIIHKSGEK  180
TKPRSFQQQQ TCHQESSPLS VPSPISPPPL LLDTSQTIDH NNIRLQAALH NLHRHENGLD  240
SFNMNNPHFM FQPNPFPFGL NLDTHFCPPS IQGTNTDFHG HFNPQLLFEG GGGGSREASS  300
FAVDGGALVD VAAYAGGRGE LDENWSGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76420.18e-84NAC family protein