PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545480.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 345aa    MW: 37925 Da    PI: 4.8966
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545480.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.82.6e-102693091055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  XP_023545480.1 269 RKRRERINERLRMLQKLVPNG-----TKVDISTMLEEAVHYVKFLQ 309
                     9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MEALGGFSDG EWESFAAMFS LEEVDQSHIP IANHADPSTE LQLPNNGGSS WFYSLDAFVP  60
NLQSYCVKQD TRSCSSCITT DDSHAAFLFP NSTDFFTPID ERNFGSSCFS DVLIEEVDKA  120
LDTAATGEDS SAERFVEINV VQGTYPALPP PSQLVDSTGA AKEPMALKRK VNNEDISDNQ  180
KKKTRVSADG QKKKKTEERK KNEKRKGKSV EEEGNAGGAS EGQCSISYSS DQEENGSQEG  240
QGATSDGGLT RKGRASRGSA TDPQSLYARK RRERINERLR MLQKLVPNGT KVDISTMLEE  300
AVHYVKFLQL QIKLLSSDEL WMFAPLAYNG LDLGLHQKLS PFGSH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181195KKKTRVSADGQKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27740.15e-40bHLH family protein