PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023545431.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 237aa MW: 27080.8 Da PI: 4.4685 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.9 | 7.5e-13 | 55 | 97 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 Er+RR+++N+++ Lr ++P+ +K++Ka+i + A+eYI++L XP_023545431.1 55 LSERNRRKKLNDRLLALRAVVPNI-----TKMDKASIIKDAIEYIQEL 97 57*********************7.....7****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MENILDEYQY YWETNMFLQT EEFDSWGVDE AFYGSYDSSS PDGTPSSLEA SKNILSERNR 60 RKKLNDRLLA LRAVVPNITK MDKASIIKDA IEYIQELRAE EKRIEAEISD LESGKIKNRA 120 TNEDDDGILR EKRTNKNRQV PEPPPSFPIE VLDLRVNYMG EKTMVVSLTC GRRSDTIMKI 180 CQVIESLKMK IITATITIVA NKLLITLFLE EEIAEEEEVK VKIEAAIAAI SDPQNPI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 3e-59 | bHLH family protein |