PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023545301.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 315aa MW: 35677.5 Da PI: 5.058

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023545301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.7	4.5e-09	249	283	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp++ee+ +L+ +gL+++q+ +WF N+R ++ XP_023545301.1 249 KWPYPTEEEKSKLSVITGLDQKQINNWFINQRKRH 283 569*****************************885 PP
2	ELK	34.8	3.6e-12	203	224	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK++Ll+KYsgyL+sLk+EF+ XP_023545301.1 203 DLKEMLLKKYSGYLSSLKKEFL 224 6********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MDEFYRLNNP VMASYSNGVL GGEAIASTSC GDIHEALMVD DELLHLEAEP TTGLNMSDMI 60 KTQIINHPLY PKLVSAYIEC QKVGAPPQVA SLLEEIGREN HPSRSCIELG ADPQLDNFMS 120 YCEVLHQYKN ELSKPFDEAA MFLTNIELEL SNLCKGSFTA TSESRSVIND EVAKTPEEEP 180 SSYGEVETTG NHEPFSTRKT NQDLKEMLLK KYSGYLSSLK KEFLKKRKKE KLPKDARMAL 240 LEWWSTHYKW PYPTEEEKSK LSVITGLDQK QINNWFINQR KRHWKPPEDM RFMLMDGAGA 300 GVGDGECIKG LNQAI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	219	228	LKKEFLKKRK
2	225	229	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	2e-70	TALE family protein