PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023545208.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 261aa    MW: 29104.2 Da    PI: 5.6633
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023545208.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY70.62.1e-22119180259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTE.EEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkv.veitYegeHnhe 59 
                     +Dg +WrKYGqK ++++++p+sYYrCt++   +Cp+ k+v+r +++ k+  eitY ++H++ 
  XP_023545208.1 119 EDGRAWRKYGQKAIQNKTYPKSYYRCTHKfdqSCPAVKHVQRIEDNSKImYEITYISDHTCA 180
                     79**************************9999***********988886269*******996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MEATGYRHQR LTAEARRRII EILRRGRQSA AQLQIDLQSA AAASAGLNWL ALADEIESSF  60
AEVISLVVSS ESASCPDHSL CSDLDSGYSR RSPAVKDLGR GNKRRKLANT RTVTAATAED  120
GRAWRKYGQK AIQNKTYPKS YYRCTHKFDQ SCPAVKHVQR IEDNSKIMYE ITYISDHTCA  180
PASPTADTSS NSYNLICFSD SHNGQFTEGT DDDATKVGET TMASGVMNEI DLWAEFNDFE  240
TQYGLFGDNE DPYFFVDSFL K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103130KRRKLANTRTVTAATAEDGRAWRKYGQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-25WRKY family protein