PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023545145.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 302aa MW: 33651.6 Da PI: 7.1428 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.3 | 1.1e-17 | 82 | 134 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + +++ eq+++Le+ Fe +++ e++ +LAk lgL+ rq+ +WFqNrRa++k XP_023545145.1 82 KKRLNLEQVKALEKSFELGNKLEPERKLQLAKALGLQPRQIAIWFQNRRARWK 134 4568889*********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 126.5 | 1.2e-40 | 80 | 171 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekk+rl+ eqvk+LE+sFe +kLeperK +la++Lglqprq+a+WFqnrRAR+ktkqlE+dy++Lk++++alk++n+ L++++++L+++l XP_023545145.1 80 EKKKRLNLEQVKALEKSFELGNKLEPERKLQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDVLKKQFEALKADNDVLQAQNTKLHAQLL 171 69**************************************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MASPHHSHSF MFQSRPADHH DYAPTATASF NNIPFCPPHL YFHDGVVPLM MKRSMSFSEN 60 GCEEVNGDEG LSDDGSALGE KKKRLNLEQV KALEKSFELG NKLEPERKLQ LAKALGLQPR 120 QIAIWFQNRR ARWKTKQLER DYDVLKKQFE ALKADNDVLQ AQNTKLHAQL LALKTKDSGE 180 VAAGGSATVN LKKENERCWS SDNSCDINLE MSRTQASITS NGSSGGRGCS QPGIKDLFPS 240 AAFRSAAITQ LLQHGSSRST VDHSPVIQEE SFTQMFNGME EQQQTTAAGF WPWGSDQNSH 300 FH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 129 | 137 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15150.1 | 1e-81 | HD-ZIP family protein |