PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023545045.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 259aa MW: 29209.8 Da PI: 10.717 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.9 | 2.1e-09 | 78 | 128 | 3 | 53 |
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIks 53 ++h +E+ RR+ri +++Lr +lP+ k++ Kl Ka +L ++++ +k+ XP_023545045.1 78 QKHRLAEQSRRNRISGQYDTLRAILPSiY-KTDMSKLKKAFVLSETIRMVKE 128 68*************************55.9****************99875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MSNLHYPVTG ALQLSFESLS SINMESLHDR ASVMQSIQSY PTSGTMHQMY PQGQPLMIKH 60 YSPISSFPRK ENTLHAAQKH RLAEQSRRNR ISGQYDTLRA ILPSIYKTDM SKLKKAFVLS 120 ETIRMVKEFK KLVSEKRATN REVGDCGIPS GADRLSLEHC DGGEGMVKAV MSCEDRPNIM 180 AELAKALKTV KVKLVRAEMV TMGGRNKFAL WMQGPKEGPG VLKRVLEAVM RRPSWIARKH 240 RSSWHSRAST AYNFNRATS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38070.1 | 4e-23 | bHLH family protein |