PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544854.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 404aa    MW: 44231.4 Da    PI: 4.8425
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544854.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.63.5e-16183229455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      hn+ E+rRR+riN+++  L+ l+P++      K +Ka++L  A+eY+k+Lq
  XP_023544854.1 183 VHNMSEKRRRSRINEKMKALQNLVPNS-----NKTDKASMLDDAIEYLKQLQ 229
                     6*************************7.....5******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MDHSISNNCD QNACSSSTWT LPATATATAA VSSSSPPDEI SLFLQQMLLR SSSAAPHSSL  60
LFSSPSPSIF SELTCNIRAF TPPTHNISPP YGPPNAIPEE ISPVDASEQF ANFSSSGVVH  120
DPLRSCPTPA PPNASSIHVG ASDQYENDEF ECESEGLEAL VEDDLPTKPN PRSSSKRSRA  180
AEVHNMSEKR RRSRINEKMK ALQNLVPNSN KTDKASMLDD AIEYLKQLQL QLQMLSMRHG  240
LSLHPMNLPG SLQYLQLSPM RMDFGEGSRS LPSDQERPNQ IFLSLPDQKA ASIHPFMSDI  300
GRTNPQTPFE LAPPIQTHLV PFYLSGSPKS KEICREALRD HQVNAIGQSE TTPFLSCPNS  360
IPAPPDLQEL QNGVSLEPCI IEENRSASTQ AEQLKQQSCN DQDC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.13e-32bHLH family protein