PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023544851.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 349aa MW: 40610.5 Da PI: 5.094

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023544851.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	178	2.5e-55	13	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv +yL+kkv+++k++l +vik++d+y++ePwdL++ ++e++ewyfFs++dkky+tg+r+nrat +g+Wkatg+dk+v XP_023544851.1 13 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIKDIDLYRIEPWDLQEkcwIGYEEQNEWYFFSHKDKKYPTGTRTNRATLAGFWKATGRDKAV 106 69**************************.9***********953543344677******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k++l+g++ktLvfy+grap+g+ktdW+mheyrle XP_023544851.1 107 YD-KNKLMGMRKTLVFYRGRAPNGQKTDWIMHEYRLE 142 .999*****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MMESMESMES SCVPPGFRFH PTDEELVGYY LRKKVASQKI DLDVIKDIDL YRIEPWDLQE 60 KCWIGYEEQN EWYFFSHKDK KYPTGTRTNR ATLAGFWKAT GRDKAVYDKN KLMGMRKTLV 120 FYRGRAPNGQ KTDWIMHEYR LESDENGPLQ EEGWVVCRAF KKRTTGQSKT AVEQWDSSYF 180 YDEPIGVSSA IDPLEFISRQ PPPQGLLEHN NIMCKQEMEA ENVKLLQYND PFVQLPQLES 240 PSLPLVKRSS SISLLSDCYE GEHQPTKRRN NTNNTKVTDW RALDKFVASQ LSQDEAFEGE 300 GDSRFGAQNN SHNHNSVDMA ILLMQNRVDD EENMYKGFLS SNLESNMYY

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MMESMESMES SCVPPGFRFH PTDEELVGYY LRKKVASQKI DLDVIKDIDL YRIEPWDLQE  60
KCWIGYEEQN EWYFFSHKDK KYPTGTRTNR ATLAGFWKAT GRDKAVYDKN KLMGMRKTLV  120
FYRGRAPNGQ KTDWIMHEYR LESDENGPLQ EEGWVVCRAF KKRTTGQSKT AVEQWDSSYF  180
YDEPIGVSSA IDPLEFISRQ PPPQGLLEHN NIMCKQEMEA ENVKLLQYND PFVQLPQLES  240
PSLPLVKRSS SISLLSDCYE GEHQPTKRRN NTNNTKVTDW RALDKFVASQ LSQDEAFEGE  300
GDSRFGAQNN SHNHNSVDMA ILLMQNRVDD EENMYKGFLS SNLESNMYY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G18060.1	1e-120	NAC family protein