PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023544840.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | Dof | ||||||||
Protein Properties | Length: 249aa MW: 27837 Da PI: 9.7272 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 117.9 | 4e-37 | 61 | 119 | 3 | 61 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e+alkcprC+stntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg r+n+k+ XP_023544840.1 61 ETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNNKR 119 6789************************************************9999876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MVFPSHPSNY LDPTTHQWQH QTPTHQSGTS FQLVSPPRAP PQVRPGSMVD RARMANLPVP 60 ETALKCPRCE STNTKFCYFN NYSLSQPRHF CKTCRRYWTR GGALRSVPVG GGYRRNNKRT 120 KSTSKSPVNS QCQPTTITEI SGGETMRLNY VQNEGGMDST HPPIGITSFL GFDQIQWRPQ 180 LQLHRSQPAR LLGNDGGGGG DASSSYSIVG KMEATKMEDD GEHHVNVGKP YWDRHYWNAF 240 NPSSSSSHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G55370.1 | 3e-46 | Dof family protein |