PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023544743.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 204aa MW: 24034.9 Da PI: 5.2004 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63 | 4.4e-20 | 52 | 107 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r+k+ +++++qle+Le++F+++ ++ +++ +L+k+lgL+ rq+ vWFqNrRa+++ XP_023544743.1 52 RKKKNRLSEDQLERLERCFQEEGKLEPDTKMQLSKELGLQPRQIAVWFQNRRARWR 107 79999**************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 115.7 | 2.8e-37 | 53 | 145 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +kk rls++q++ LE++F+ee kLep+ K++l++eLglqprq+avWFqnrRAR++tkqlE y++Lk+++d++++e+++L++ev +Lr+ l+e XP_023544743.1 53 KKKNRLSEDQLERLERCFQEEGKLEPDTKMQLSKELGLQPRQIAVWFQNRRARWRTKQLEYLYDTLKQEFDTISKEKHTLQQEVLKLRSMLRE 145 59**************************************************************************************98875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MEWNSGSLIP TFVSPPSPYN YYYNYNLDQF PVLETKKQAV ECVVGGVDEE KRKKKNRLSE 60 DQLERLERCF QEEGKLEPDT KMQLSKELGL QPRQIAVWFQ NRRARWRTKQ LEYLYDTLKQ 120 EFDTISKEKH TLQQEVLKLR SMLREQTMRN QEPMAYEDVS GEATVESTSV GNYMYNNVED 180 FNQISGSGPP FWWGAEAAHR PSYP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 4e-41 | HD-ZIP family protein |