PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023544742.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 226aa MW: 26360.8 Da PI: 9.3654 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 66 | 5.1e-21 | 62 | 117 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++t+++++qle Le+ F+++ +++ +++ +L+k+lgL+ rq+ +WFqNrRa++k XP_023544742.1 62 KKTKTKLSPDQLESLERRFQEEVKLDPDRKMKLSKELGLQPRQIAIWFQNRRARWK 117 799****************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 108.7 | 4.3e-35 | 64 | 152 | 2 | 90 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 k +ls +q+++LE+ F+ee kL+p+rK++l++eLglqprq+a+WFqnrRAR+ktkql + y++Lk+++d++++++++L+++v +L++ XP_023544742.1 64 TKTKLSPDQLESLERRFQEEVKLDPDRKMKLSKELGLQPRQIAIWFQNRRARWKTKQLQHLYDTLKQEFDTISNQKHTLQQQVMKLKTM 152 5889**********************************************************************************965 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MEWNNGSLTP KLLSPPLLHH RSSYTPCYNY NYIYNLDHFP VLERKNPAEE SVVGGVDQKK 60 KKKTKTKLSP DQLESLERRF QEEVKLDPDR KMKLSKELGL QPRQIAIWFQ NRRARWKTKQ 120 LQHLYDTLKQ EFDTISNQKH TLQQQVMKLK TMLLLREEAT RNPQGSMAYT DEETAESTSV 180 GVRSSTNNYT YNNKVEDLVE ISGSGPPPPP PFWWGAEEDA HRPSYP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 120 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 6e-38 | HD-ZIP family protein |