PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023544490.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 358aa    MW: 39651.2 Da    PI: 6.0325
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023544490.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.18.4e-052562881754
                     HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      ++   L++l+ +      +K + a++L +A+eYIk L
  XP_023544490.1 256 GDRVTALQQLVSPF-----GKTDTASVLHEAIEYIKFL 288
                     55666677777776.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MAEDFQAAIC GDNWWSSSRT MLVAVGGLSP CSMGIGDLAW PPADDFSDIK PKSTANYSDN  60
QNSMFFQDYS TSDHWNQPHD FLLKRGDYLL EQNGVNCMNC SSTSQGLFPL DSGLYGYPSP  120
STKLLHGLYN NDDDDDHHHH PDPHSLFNAA TTSINTNYPS NYLIKPSLPI PPPSQPVSPA  180
LHFTNNTPFW NASHAPPSIE IPQNCRLGFK AMNNGNCEDG EEARKGDKNE PPVLKRPRIE  240
TPSPLPTFKV RKEKLGDRVT ALQQLVSPFG KTDTASVLHE AIEYIKFLHD QVSLLSTPYM  300
KNNNGITPIQ HQQVSEKADP KQDLKSRGLC LVPISSTFPV TNATTADFWS PTFGGTFR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.18e-57bHLH family protein