PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023544441.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 331aa MW: 37673.2 Da PI: 7.2301

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023544441.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.2	1.1e-55	23	149	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelv++yL++kv + + ++ +i e+d++k+ePw+Lp k+k +ekewyfF+ +d+ky+tg r+nrat+sgyWkatgkdke+++ XP_023544441.1 23 LPPGFRFHPTDEELVTHYLTPKVLDPNYSA-AAIGEADLNKSEPWELPGKAKMGEKEWYFFCIKDRKYPTGMRTNRATESGYWKATGKDKEIFR- 115 79***********************999.78***********99999*************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 +++ vg+kktLvfy+grapkgek++Wvmheyrle XP_023544441.1 116 GKRIVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 149 999***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MQNHSVMRNP NQNHAGEEDH IELPPGFRFH PTDEELVTHY LTPKVLDPNY SAAAIGEADL 60 NKSEPWELPG KAKMGEKEWY FFCIKDRKYP TGMRTNRATE SGYWKATGKD KEIFRGKRIV 120 GMKKTLVFYR GRAPKGEKSN WVMHEYRLEG RSPLSPNLLK PIKTEWVICR IFYKSSGDKR 180 THISELLPHK HISDGNGNGN SPALPPLMEY SHLQTPYTYD ARASRVTCFS NNPLLHETKP 240 YTNADMLYNT NSLPPFSYPN PPPDSGWPPG NSIVKMLLEN QTGGGSGLHY NNNNNNNNNQ 300 VFSHGIGMME EDPHDPSSAD DPIDLENLWN Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	2e-98	NAC family protein