PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023544127.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | Nin-like | ||||||||
Protein Properties | Length: 201aa MW: 23338.9 Da PI: 9.9622 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 85 | 6.9e-27 | 79 | 128 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + i l+dl+kyF+ pi++A+++L+v+lTvLKr+CR++GI+RWPhRkiks+ XP_023544127.1 79 AGIALSDLAKYFDVPITEASRSLNVGLTVLKRKCREFGIHRWPHRKIKSI 128 6799********************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MMSSGFSTEF PNVADPMHDS YLSCFPKLND DKFLHQDLNF LPCSSSMAVS KGPEIHQMKE 60 FCEPVLAKKK RRATSEHIAG IALSDLAKYF DVPITEASRS LNVGLTVLKR KCREFGIHRW 120 PHRKIKSIDG LIRDLQEEAK HREEDQKALM AVTKRQMMLQ NERESIERTP FRELESETKR 180 FRQDVFKRRH KARALVSHSP V |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 68 | 72 | KKKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35590.1 | 6e-48 | Nin-like family protein |