PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023543690.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 258aa MW: 29246 Da PI: 9.4162 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 106.7 | 2.9e-33 | 58 | 197 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.......leleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk......sgy 82 p+G++F+P+d++++ e+L++kve++k +e+ ++++ +i++++P++Lp ++++ + +fF++ +k+y+ g+rk+r++k + + XP_023543690.1 58 PAGVKFDPSDQQIL-EHLEAKVERDKrklhpliHEFITTLEGDdGICYTHPQNLP-GMRKDGQIRHFFHRPSKAYTAGTRKRRKVKadeegsDTR 150 89**********99.99******9996665442222222443335**********.566677788******************855556555778 PP NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 W++tgk+++v+ +g ++g kk+Lv+y +g+++k++kt+W+mh+y+l XP_023543690.1 151 WHKTGKTRPVMG-GGVVIGFKKILVLYsnHGNQRKPQKTNWIMHQYHL 197 ************.**************7768999************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MMIWFSNTND AVFTDGNHQD DRSPVAFPAL AGPTCAHSLH FQLQLQLQGG LEDWGRAPAG 60 VKFDPSDQQI LEHLEAKVER DKRKLHPLIH EFITTLEGDD GICYTHPQNL PGMRKDGQIR 120 HFFHRPSKAY TAGTRKRRKV KADEEGSDTR WHKTGKTRPV MGGGVVIGFK KILVLYSNHG 180 NQRKPQKTNW IMHQYHLGVT EHEKDGQLVA SKVFFQKRPR QSCSHQNPTT QWDGGGHSPE 240 ISAVFIDCSN PMMSSNYV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G28470.1 | 2e-94 | NAC family protein |