PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023543370.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 255aa MW: 28688.8 Da PI: 5.6791 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40 | 7.1e-13 | 105 | 151 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++ErrRR+++ ++f+ L l+P + K +Ka++L A++Y+k+Lq XP_023543370.1 105 QHVIAERRRREKLSQSFAALSALIPGL-----NKTDKASVLGGAIKYVKDLQ 151 699***********************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MEISSPKWLS ELEMMESAYQ HEITNYPHDY TLDELNFPTN FPATEKLITS VQLDSISSSQ 60 FISFGDSPEI ENLDVNQNRY VIGYEEGHEI KKRATIGRTS GNGQQHVIAE RRRREKLSQS 120 FAALSALIPG LNKTDKASVL GGAIKYVKDL QERVKWAEEE AGDEEGRVIK SVPNIETRVL 180 ESDVLVRIHC KKQKGCFSNI ITQIQMLKLT IVNSCVLPFG HSRLDITIIA QMEVGFCMTA 240 TDLGKKLTQT LVDLI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 110 | 115 | ERRRRE |
2 | 111 | 116 | RRRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37850.1 | 2e-42 | bHLH family protein |