PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023543369.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 466aa MW: 52271.1 Da PI: 6.8978

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023543369.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.1	1.7e-09	296	333	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LA+++gL+ +qV++WF N R + XP_023543369.1 296 FEHflHPYPTDTDKLMLANQTGLSRSQVSNWFINARVR 333 564459******************************88 PP
2	BELL	90.4	1.8e-29	171	240	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e +++k++L+++l+eV++rYk y++q+q+v+ Fe v glg+a+pY++lA ka+ +hFr Lk+aia+q+ XP_023543369.1 171 IESRRRKSRLITMLDEVYRRYKLYYQQMQAVVTTFEYVGGLGNAAPYVNLAVKAMFKHFRFLKNAIADQL 240 58899***************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MAEGFELYHV PQQSRRDKLR VGVGSGAANN PNFLPLYHHH GGGGGGDDDD DDPSSLISTD 60 FDFHQNPSFN LHNHNHYPPT PTAAYATAAH HLPPLLPDQQ PPLSLDLNLQ HRYASSPTPL 120 LTSKFLKPAQ QLLHDLFHYA DKLPPDSPLL DSLGGDIPTA ALHHDPTDDG IESRRRKSRL 180 ITMLDEVYRR YKLYYQQMQA VVTTFEYVGG LGNAAPYVNL AVKAMFKHFR FLKNAIADQL 240 QLNKQHQQPP PPPPYNPYCQ RSIHNNSGGF VDHQPVWRPQ RGLPESAVTV LRAWLFEHFL 300 HPYPTDTDKL MLANQTGLSR SQVSNWFINA RVRLWKPMVE EIHMLETREA QKSQHRDANN 360 GTPLNNNNNN DDHHHLSSTN QSLNNASSSN HDQHPLHLSN SNFFPTHHPH PPAGATTMGA 420 GNVSLTLGLH QNHAGITLTE PFPINAAQHF NLGLEANGEG FVNEWF

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MAEGFELYHV PQQSRRDKLR VGVGSGAANN PNFLPLYHHH GGGGGGDDDD DDPSSLISTD  60
FDFHQNPSFN LHNHNHYPPT PTAAYATAAH HLPPLLPDQQ PPLSLDLNLQ HRYASSPTPL  120
LTSKFLKPAQ QLLHDLFHYA DKLPPDSPLL DSLGGDIPTA ALHHDPTDDG IESRRRKSRL  180
ITMLDEVYRR YKLYYQQMQA VVTTFEYVGG LGNAAPYVNL AVKAMFKHFR FLKNAIADQL  240
QLNKQHQQPP PPPPYNPYCQ RSIHNNSGGF VDHQPVWRPQ RGLPESAVTV LRAWLFEHFL  300
HPYPTDTDKL MLANQTGLSR SQVSNWFINA RVRLWKPMVE EIHMLETREA QKSQHRDANN  360
GTPLNNNNNN DDHHHLSSTN QSLNNASSSN HDQHPLHLSN SNFFPTHHPH PPAGATTMGA  420
GNVSLTLGLH QNHAGITLTE PFPINAAQHF NLGLEANGEG FVNEWF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	178	SRRRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02030.1	5e-70	TALE family protein