PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023543278.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TALE

Protein Properties

Length: 641aa MW: 70368.4 Da PI: 7.2767

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023543278.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.6	5e-09	449	486	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + XP_023543278.1 449 FEHflHPYPSDADKLLLARQTGLSRNQVSNWFINARVR 486 664559******************************88 PP
2	BELL	113.7	9.5e-37	309	380	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +r e+q++k+kLls+l+eV++rY+ y+eq+q+v++sF+ v+g g+a+pYt+l +ka+SrhFrcL+da+aeq+ XP_023543278.1 309 DRIEHQRRKVKLLSMLDEVERRYNLYREQMQMVVNSFDLVMGFGAAAPYTTLTQKAMSRHFRCLRDALAEQL 380 589*******************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 641 aa Download sequence
MGIPKAPLIF STNSSMSHHF HHHQLKINLL PQQIRPLHSF SDSIPPSTVA GIDPQLHHVY 60 APTSTPGTML SEIFNFPPPS SSAVVEFSDN FPTLRPPNSV APMPLFLMNP PPPLRSPSSP 120 STSSTLHMLL PNPHGGFQGG VGVGDQAEFG QFVVESRGLS LSLHSSDDGV KGDELGVRED 180 GGVLYSYNNN NSNNNNQVRD GGSGSTSSIL QYSLKNNSEN SPLASQIMNP NHQVQIGFGS 240 SLGVVNVLRN SRYVKPTQEL LEEFCSVGKV QFKKNKFNTE TTTTASAAAT AAGGSSSSSK 300 DQPPLSAADR IEHQRRKVKL LSMLDEVERR YNLYREQMQM VVNSFDLVMG FGAAAPYTTL 360 TQKAMSRHFR CLRDALAEQL KQSYEALGEK GGNGGYGVTK GETPRLKLLE QSLRQQRAFH 420 QMGMMEQEAW RPQRGLPERS VNILRAWLFE HFLHPYPSDA DKLLLARQTG LSRNQVSNWF 480 INARVRLWKP MVEEMYQLED KVETDHHSDH QGSEHNNNKT KNSDMNAQNP TPTTSSAAPP 540 PPATTAAAQQ LTAAFTATHE YSELHDVWRH GSGDHQHYET VTGTDNMNNN HGPTLIRFGP 600 TATATGDVSL TLGLRHTGNT SSSSSAAADN PSFFLRDFGH S

Sequence ? help Back to Top

Protein Sequence Length: 641 aa Download sequence

MGIPKAPLIF STNSSMSHHF HHHQLKINLL PQQIRPLHSF SDSIPPSTVA GIDPQLHHVY  60
APTSTPGTML SEIFNFPPPS SSAVVEFSDN FPTLRPPNSV APMPLFLMNP PPPLRSPSSP  120
STSSTLHMLL PNPHGGFQGG VGVGDQAEFG QFVVESRGLS LSLHSSDDGV KGDELGVRED  180
GGVLYSYNNN NSNNNNQVRD GGSGSTSSIL QYSLKNNSEN SPLASQIMNP NHQVQIGFGS  240
SLGVVNVLRN SRYVKPTQEL LEEFCSVGKV QFKKNKFNTE TTTTASAAAT AAGGSSSSSK  300
DQPPLSAADR IEHQRRKVKL LSMLDEVERR YNLYREQMQM VVNSFDLVMG FGAAAPYTTL  360
TQKAMSRHFR CLRDALAEQL KQSYEALGEK GGNGGYGVTK GETPRLKLLE QSLRQQRAFH  420
QMGMMEQEAW RPQRGLPERS VNILRAWLFE HFLHPYPSDA DKLLLARQTG LSRNQVSNWF  480
INARVRLWKP MVEEMYQLED KVETDHHSDH QGSEHNNNKT KNSDMNAQNP TPTTSSAAPP  540
PPATTAAAQQ LTAAFTATHE YSELHDVWRH GSGDHQHYET VTGTDNMNNN HGPTLIRFGP  600
TATATGDVSL TLGLRHTGNT SSSSSAAADN PSFFLRDFGH S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-121	TALE family protein