PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023543134.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB_related | ||||||||
Protein Properties | Length: 308aa MW: 34023.2 Da PI: 10.2456 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 35 | 3.2e-11 | 5 | 55 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46 +++WT+eE+ l+ +v ++G g W+tI R+ ++k++w++ XP_023543134.1 5 KQKWTAEEEAALKAGVIKHGAGKWRTILTDPEfssilHQRSNVDLKDKWRN 55 79***********************************99***********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 308 aa Download sequence |
MGAPKQKWTA EEEAALKAGV IKHGAGKWRT ILTDPEFSSI LHQRSNVDLK DKWRNINVTA 60 IWGSRQKAKL ALKKNSLALK HHDNPMALST MLQNEEIVDA KPLAISNGTT RTNAPKEPLA 120 RLDRLISEAI NNLKEPRGSD RAAIALYIEE HYWAPPNLKK LLSTKLKHMT ANGKLIKVKH 180 KYRIAPNSAL SGRRNVPLLL LENKHLDSSK AEKSEVKIIT KSQVDSELSK MKVMTAEEAA 240 IAAARAVAEA EAAIAEAERA AREAEEAEAE AESAQVFAEA AMKALECRTF PSRSPVQKVL 300 LQDNKTLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49950.1 | 3e-73 | MYB_related family protein |