PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023542961.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 256aa MW: 27910.9 Da PI: 9.5731 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.8 | 3.5e-12 | 67 | 113 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riNs +++Lr l+P + K +Ka+ L ++v +k+L XP_023542961.1 67 KNHSEAERRRRERINSHLSTLRGLVPCP-----AKRDKATLLAEVVSQVKEL 113 58*************************8.....699******9999888877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MAYSYDATAS IDSFLHSLEN FNCGFVRGGS ILSQSLVLNG EKGGVAKAPI LPAKKRGSEE 60 KVLAALKNHS EAERRRRERI NSHLSTLRGL VPCPAKRDKA TLLAEVVSQV KELKKKAAEA 120 INGVFVPMDT DEVKVEPCGI EANAAYMTFK ATLCCEYRPE LLSDLKQALD ALHLKLAKAE 180 ISTLGNRVKN VFFFTSSIAE NGEHSKASQR LVSSVHQAIS FVLEKASSQE YSPRTTLPTK 240 RQRLCSSYTS SSSSGS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 73 | 78 | ERRRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56770.1 | 3e-34 | bHLH family protein |