PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023542834.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 201aa MW: 22460.3 Da PI: 9.4179 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 25.8 | 1.9e-08 | 126 | 173 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR +iN+++ L++++P + k + a +L + ++Y++sLq XP_023542834.1 126 SHSVAERIRRGKINERLRCLQDIVPGC----YKTMGMAVMLDEIINYVQSLQ 173 8*************************9....3559999***********998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 201 aa Download sequence |
MAAEFTPNFQ SLKPSPFPLM EADSNIPVLF NDGFFSDHAA PPRFPENRRE NLPKIFSPAN 60 QLASPVFERK KRKLETDASA SSSGNSLPQR SETAINTKNS SGRGKQPEKG RGVVHVRAKR 120 GQATDSHSVA ERIRRGKINE RLRCLQDIVP GCYKTMGMAV MLDEIINYVQ SLQNQVEFLS 180 MKLTAASSYY DFNSDEAYEQ A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G73830.1 | 4e-59 | bHLH family protein |