PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023542825.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 366aa MW: 40462.1 Da PI: 6.5077 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.8 | 2.3e-14 | 167 | 213 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ +K +Ka+ L ++++++k+L XP_023542825.1 167 KSHSEAERRRRERINNHLAKLRSLLPST-----TKTDKASLLAEVIQHVKEL 213 79*************************9.....8****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 366 aa Download sequence |
MRGEDQEQDH HHQHQGECSQ TIENMFQEQL LLHQQLQNNN TDHIIYGDHH HHGAGRGLIF 60 PADVVSPVLN SWPPLNPFLI PPPPPPPPPT SLCSSSSYGN LFNRRPANCL QFAYDGTSSA 120 DHLGRIISTT LGPVVHHGSA APFGLQAELG KMSAQEIMDA KALAASKSHS EAERRRRERI 180 NNHLAKLRSL LPSTTKTDKA SLLAEVIQHV KELKRQTSLI AETSPIPTDI DELTVDDASD 240 EMMINGAKFV IKASLCCEDR SDLLPDLIKT LKSLRLRTLK AEITTLGGRV RNVLFVTGED 300 DEPSTDHNNN NNNNNNNNPN SDTQQQQQHS ISSIQEALKA VMEKTGPDDS SSGNIKRQRT 360 NNINIL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 173 | 178 | ERRRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 1e-77 | bHLH family protein |