PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023542756.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 184aa MW: 20763.9 Da PI: 6.5288 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.7 | 5.5e-05 | 46 | 79 | 19 | 55 |
HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +f eL ++l + +s+K +K+ iL Av+ I +L+ XP_023542756.1 46 RFLELNSILNHG---TSPKIDKSVILGDAVRMILQLR 79 578999999998...9*******************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence |
MKSPEITDWV FDYALIEDFP VPGGDLPSLD LPVFTLSSRD FTASFRFLEL NSILNHGTSP 60 KIDKSVILGD AVRMILQLRD EAQKLKESNE NFLEKINEMK AEKNELRDEK QRLKEAKDNL 120 KQKMKTFITQ PSFLPHPSAF SAPNHVVGAK FVPVIGYPGV SMWKLMPQGA IDTSQDHVLR 180 PPVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 5e-53 | bHLH family protein |