PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023542754.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 230aa    MW: 25944.6 Da    PI: 9.3853
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023542754.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.31e-1178125555
                     HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +   E+ RR+r+N++f eL ++l +    +s+K +K+ iL  Av+ I +L+
  XP_023542754.1  78 KAHKEKVRRNRLNDRFLELNSILNHG---TSPKIDKSVILGDAVRMILQLR 125
                     5678*********************9...9*******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MKSPEITDWV FDYALIEDFP VPGGDLPSLD LPVFTLSSRD FTASFREDFD EAHGKLNDIK  60
ESGSRKRMSS GSGASLSKAH KEKVRRNRLN DRFLELNSIL NHGTSPKIDK SVILGDAVRM  120
ILQLRDEAQK LKESNENFLE KINEMKAEKN ELRDEKQRLK EAKDNLKQKM KTFITQPSFL  180
PHPSAFSAPN HVVGAKFVPV IGYPGVSMWK LMPQGAIDTS QDHVLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-61bHLH family protein